50:160:345: Physical Chemistry I
50:160:347: Physical Chemistry I Laboratory
(Fall 2023)

Lectures: Tuesdays and Thursdays from 9:35 AM to 10:55 AM, Room CNS-213
Laboratory: Wednesdays from 2:00 PM to 5:00 PM, Room BSB-134

For more information, see the lecture syllabus and the lab syllabus.

50:160:346: Physical Chemistry II
(Spring 2024)

Lectures: Tuesdays and Thursdays from 9:35 AM to 10:55 AM, Room CNS-213

For more information, see the syllabus.

50:115:422/522: Protein Structure and Function
(Spring 2024)

Lectures: Mondays from 6:00 PM to 8:50 PM, Room JHSC-202

For more information see the syllabus.

50:160:447/547: Computational Chemistry
(Spring 2023)

Lectures: Mondays from 6:00 PM to 8:50 PM, BSB-336

For more information see the syllabus.

CHEM 234: Thermodynamics
(Fall 2017)

Lectures: Wednesdays and Fridays from 8:45 to 10:00, Room CC-115
Tutorials: Mondays, Tuesdays, Wednesdays, Thursdays from 13:15 to 14:30; Tuesdays from 18:00 to 19:15

For more information, see the syllabus.

CHEM 235: Kinetics of chemical reactions
(Fall 2016)

Lectures: Tuesdays and Fridays from 8:45 to 10:00, Room CC-312
Labs: Mondays from 13:30 to 17:30, Thursdays from 18:30 to 22:30, Room SP-220

For more information, see the syllabus.

CHEM 335: Biophysical chemistry
(Winter 2018)

Lectures: Tuesdays from 18:00 to 20:30, Room CC-106
Labs: Wednesdays from 18:30 to 22:30, Thursdays from 13:30 to 17:30, Room SP-320

For more information, see the syllabus.

CHEM 436/630: Molecular modelling of proteins
(Winter 2018)

Lectures/Labs: Wednesdays from 18:00 to 22:00, Room CC-203

This course offers a hands-on introduction to the computer tools used to predict the structure of a protein from its amino acid sequence, and to get insight into its function. The student will learn modelling techniques such as sequence alignment, homology modelling, computer visualization, molecular dynamics, and molecular docking. Computer laboratory with pre-lab lectures.

For more information, see the syllabus.

Tutorials and overheads:
Introduction: Overheads
#1a: Protein sequence alignment (+ overheads)
#1b: Comparison and validation of alignments (+ overheads)
#1c: Protein visualization (+ overheads)
#2a: Homology modelling 1 (+ overheads)
#2b: Homology modelling 2
#2c: Comparison/validation of models (+ overheads)
#3a: Empirical force fields (+ overheads)
#3b: Molecular dynamics: Simple systems (+ overheads)
#4a: Molecular dynamics: Setup (+ overheads)
#4b: Molecular dynamics: Analysis
#5: Molecular docking (+ overheads)

Sequences:
01 02 03 04 05 06 07 08 09 10 11

CHEM 498P/630P: Statistical mechanics
(Summer 2009, May-June)

Lectures: Tuesdays and Thursdays from 10:15 to 13:00

For more information, see the syllabus.

Lecture notes:
Part 1: Fundamentals
Part 2: Ideal systems
Part 3: Read gases and liquids ("Molecular dynamics" section only)
Part 4: Phase transitions
Part 5: Nonequilibrium statistical mechanics